YLEX & SCOS & Protein Marker publications

YLEX Yeast Expression Kit

1.Disrupting a phospholipase A2 gene increasing lipid accumulation in the oleaginous yeast Yarrowia lipolytica, Jiaxin Li, Jing Xu, Jianchang Ruan, Huimin Meng, Hang Su  Xingfeng Han, Ming Lu, Fuli Li, Shi’an Wang-Journal of Applied Microbiology,2020

2.Established and Upcoming Yeast Expression Systems, Burcu Gündüz Ergün, Damla Hüccetoğulları, Sibel Öztürk, Eda Çelik, Pınar Çalık-Methods in Molecular Biology ,2019

3.Ameliorating the Metabolic Burden of the Co-expression of Secreted Fungal Cellulases in a High Lipid-Accumulating Yarrowia lipolytica Strain by Medium C/N Ratio and a Chemical Chaperone, Hui Wei1-Frontiers in Microbiology,2019

4.Engineered microbes and methods for microbial oil production, Gregory Stephanopoulos, Mitchell Tai, Sagar Chakraborty-Massachusetts Institute of Technology, Cambridge, MA (United States),2018

5.Robust signal peptides for protein secretion in Yarrowia lipolytica: identification and characterization of novel secretory tags, Ewelina Celińska, Monika Borkowska, Wojciech Białas, Paulina Korpys, Jean-Marc Nicaud- Applied Microbiology and Biotechnology,2018

6.Engineering the architecture of erythritol-inducible promoters for regulated and enhanced gene expression in Yarrowia lipolytica. Young-Kyoung Park, Paulina Korpys , Monika Kubiak, Ewelina Celinska, Paul Soudier, Pauline Trébulle, Macarena Larroude, Tristan Rossignol, Jean-Marc Nicaud,2018

7.Expression of an endoglucanase–cellobiohydrolase fusion protein in Saccharomyces cerevisiae, Yarrowia lipolytica, and Lipomyces starkeyi, Qi Xu, Markus Alahuhta, Hui Wei, Eric P. Knoshaug, Wei Wang, John O. Baker, Todd Vander Wall, Michael E. Himmel, Min Zhang- Biotechnology for Biofuels,2018

8.Engineering Yarrowia lipolytica for Use in Biotechnological Applications: A Review of Major Achievements and Recent Innovations, Catherine Madzak- Molecular Biotechnology,2018

9.YaliBricks, a versatile genetic toolkit for streamlined and rapid pathway engineering in Yarrowia lipolytica, Lynn Wonga, Jake Engel, Erqing Jin, Benjamin Holdridge, Peng Xu-Metabolic Engineering Communications,2017

10.Lipid production in Yarrowia lipolytica is maximized by engineering cytosolic redox, metabolism K Qiao- Nature Biotechnology, 2017

11.Enhanced production of insect raw-starch-digesting alpha-amylase accompanied by high erythritol synthesis in recombinant Yarrowia lipolytica fed-batch cultures at high-cell-densities, E Celińska – Process Biochemistry, 2017

12.Engineering oxidative stress defense pathways to build a robust lipid production platform in Yarrowia lipolytica, P Xu- Biotechnology and Bioengineering, 2017

13.A molecular genetic toolbox for Yarrowia lipolytica, EL Bredeweg- Biotechnology for Biofuels, 2017

14.Evaluation of heterologous α-amylase production in two expression platforms dedicated for Yarrowia lipolytica: commercial Po1g–pYLSC (php4d) and custom-made, A18–pYLTEF (pTEF). Celińska , Borkowska , Białas –Yeast,2016

15.Engineering Yarrowia lipolytica as a platform for synthesis of drop-in transportation fuels and oleochemicals, P Xu – PNAS, 2016

16.Engineering Yarrowia lipolytica for poly-3-hydroxybutyrate production, ZJ Li- Journal of Industrial Microbiology & Biotechnology, 2016

17.Functional overexpression and characterization of lipogenesis-related genes in the oleaginous yeast Yarrowia lipolytica , AM Silverman- Applied Microbiology and Biotechnology, 2016

18.ntegrated bioprocess for conversion of gaseous substrates to liquids, P Hu – Proceedings of the National Academy of Sciences of The United States Of, America (PNAS), 2016

19.The expression of the Cuphea palustris thioesterase CpFatB2 in Yarrowia lipolytica triggers oleic acid accumulation, A Stefan – Biotechnology progress, 2016

20.Fatty alcohol production in Lipomyces starkeyi and Yarrowia lipolytica, W Wang – Biotechnology for Biofuels, 2016

21.Characterization of phosphatidic acid phosphatase activity in the oleaginous yeast Yarrowia lipolytica and its role in lipid biosynthesis, D Hardman – Yeast, 2016

22.Engineering lipid overproduction in the oleaginous yeast Yarrowia lipolytica, K Qiao- Metabolic Engineering ,2015

23.Yarrowia lipolytica: recent achievements in heterologous protein expression and, pathway engineeringC Madzak – Applied microbiology and biotechnology, 2015

24.Cloning, expression, and purification of insect (Sitophilus oryzae) alpha-amylase, able to digest granular starch, in Yarrowia lipolytica host, E Celińska – Applied microbiology and biotechnology, 2015

25.High-throughput transformation method for Yarrowia lipolytica mutant library, screening, C Leplat – FEMS yeast research, 2015

26.Biotechnological applications of Yarrowia lipolytica: past, present and future, HH Liu- Biotechnology Advances, 2015

27.Genetic engineering of non conventional yeast for the production of valuable compounds, A Sibirny – Microb Biotechnol Prog Trends, 2014

28.Heterologous expression of xylanase enzymes in lipogenic yeast Yarrowia lipolytica, W Wang – PloS one, 2014

29.Engineering towards a complete heterologous cellulase secretome in Yarrowia lipolytica reveals its potential for consolidated bioprocessing, H Wei – Biotechnology for Biofuels, 2014

30.Biodiesel production under subcritical solvent condition using subcritical water treated whole Jatropha curcas seed kernels and possible use of hydrolysates to grow Yarrowia lipolytica, AW Go- Fuel, 2014

31.Engineering the push and pull of lipid biosynthesis in oleaginous yeast Yarrowia lipolytica for biofuel production, M Tai – Metabolic engineering, 2013

32.Bioethanol production from Yarrowia lipolytica Po1g biomass, YA Tsigie- Bioresource Technology, 2013

33.A study on the mechanism of subcritical water treatment to maximize extractable cellular lipids, PLT. Nguyen – Biomass and Bioenergy, 2013

34.Accumulation of lipid production in Chlorella minutissima by triacylglycerol biosynthesis-related genes cloned from Saccharomyces cerevisiae and Yarrowia lipolytica, HJ Hsieh – The Journal of Microbiology, 2012

35.Yarrowia lipolytica JM Nicaud – Yeast, 2012

36.Oil Production from Yarrowia lipolytica Po1g Using , Rice Bran Hydrolysate. YA Tsigie- Journal of Biomedicine and Biotechnology, 2012

37.Maximizing biodiesel production from Yarrowia lipolytica Po1g biomass using, subcritical water pretreatment. YA Tsigie – Bioresource technology, 2012

38.High efficiency transformation by electroporation of Yarrowia lipolytica, JH Wang – The Journal of Microbiology, 2011

39.Cloning and expression of a tyrosinase from Aspergillus oryzae in Yarrowia lipolytica: application in L-DOPA biotransformation, A Rao – Applied microbiology and biotechnology, 2011

40.Lipid production from Yarrowia lipolytica Po1g grown in sugarcane bagasse hydrolysate,YA Tsigie – Bioresource Technology, 2011

41.Co-expression of heterologous desaturase genes in Yarrowia lipolytica. LT Chuang – New biotechnology, 2010

42.Heterologous expression of Thermobifida fusca thermostable alpha-amylase in Yarrowia lipolytica and its application in boiling stable resistant sago starch preparation. CH Yang – Journal of Industrial Microbiology & Biotechnology, 2010


1.Direct fermentation of cellulose to ethanol by Saccharomyces cerevisiae displaying a bifunctional cellobiohydrolase gene from Orpinomyces sp. Y102. Jeng-Chen Liu, Wan-Jhu Chang, Teng-Chieh Hsu, Hui-Jye Chen, Yo-Chia Chen-Renewable Energy, 2020

Proteomics-Sharp Protein Marker III

1.Berberine Activates Aryl Hydrocarbon Receptor but Suppresses CYP1A1 Induction through miR-21-3p Stimulation in MCF-7 Breast Cancer Cells, Sheng-Nan Lo, Chun-Wei Wang, Yueh-Shieh Chen, Chiung-Chiao Huang, Tian-Shung Wu, Lih-Ann Li, I-Jung Lee, Yune-Fang Ueng-molecules,2017