1. Cloning of phaCAB genes from thermophilic Caldimonas manganoxidans in Escherichia coli for poly (3-hydroxybutyrate)(PHB) production. JH Lin, MC Lee, YS Sue, YC Liu, SY Li – Applied Microbiology and Biotechnology, 2017
  2. Identification and expression analysis of two pro-inflammatory cytokines, TNF-α and IL-8, in cobia (Rachycentron canadum L.) in response to Streptococcus dysgalactiae infection. TTT Nguyen, HT Nguyen, PC Wang- Fish & Shellfish Immunology, 2017
  3. Functional characterization and transcriptome analysis reveal multiple roles for prc in the pathogenicity of the black rot pathogen Xanthomonas campestris pv. CT Liao, YF Liu, YC Chiang, HH Lo, SC Du…,PC Hsu,YM Hsiao- Research in Microbiology, 2016
  4. Global Transcriptome Analysis of Gracilaria changii (Rhodophyta) in Response to Agarolytic Enzyme and Bacterium. EL Lim, RS Siow, RA Rahim, CL Ho – Marine biotechnology, 2016
  5. A new rapid and efficient system with dominant selection developed to inactivate and conditionally express genes in Candida albicans. WC Lai, HFS Sun, PH Lin, H Lin, JC Shieh – Current genetics, 2016
  6. A novel paramyxean parasite, Marteilia octospora n. sp.(Cercozoa) infecting the Grooved Razor Shell clam Solen marginatus from Galicia (NW Spain). M Ruiz, C López, RS Lee, R Rodríguez .,SusanaDarriba,- Journal of invertebrate Pathology, 2016
  7. Host microRNA miR-197 plays a negative regulatory role in the enterovirus 71 infectious cycle by targeting the RAN protein. WF Tang, RT Huang, KY Chien, JY Huang, Kean-Seng Laua, Jia-Rong Jhenga, Cheng-Hsun Chiub, Tzong-Yuan Wuc, Chung-Yung Chenc and Jim-Tong Hornga, – Journal of virology, 2016
  8. The infectious bronchitis vaccine strain virus is more pathogenic in chicken embryos than the wild virus strain. CT Tsai, HY Chiou, CH Wang – Veterinarski arhiv, 2016
  9. Comparative genetic analyses of human rhinovirus C (HRV-C) complete genome from Malaysia. YS Khaw, YF Chan, FL Jafar, N Othmanm, Hui Yee Chee – Frontiers in microbiology,
  10. Aligning to the sample-specific reference sequence to optimize the accuracy of next-generation sequencing analysis for hepatitis B virus. WC Liu, CP Lin, CP Cheng, CH Ho, KL Lan – Hepatology International, 2016
  11. Crayfish plague Aphanomyces astaci detected in redclaw crayfish, Cherax quadricarinatus in Taiwan. CY Hsieh, CW Huang, YC Pan – Journal of invertebrate pathology, 2016
  12. Seasonal changes in bacterial communities associated with healthy and diseased Porites coral in southern Taiwan. CH Lin, CH Chuang, WH Twan ,Shu-Fen Chiou,e Tit-Yee Wong,f Jong-Kang Liu,g Chyuan-yao Kao,b Jimmy Kuobc,- Canadian journal of Microbiology, 2016
  13. Characterization of genes encoding proteins containing HD-related output domain in Xanthomonas campestris pv. Campestris. HM Lee, CT Liao, YC Chiang, YY Chang, Yu-Tzu, YehShin,Chiao DuYi,Min Hsiao , Antonie van Leeuwenhoek, 2016
  14. A Novel Metallo-β-Lactamase Involved in the Ampicillin Resistance of Streptococcus pneumoniae ATCC 49136 Strain. CY Chang, HJ Lin, BR Li, YK Li – PloS one, 2016
  15. Synaptotagmin-like protein 2 gene promotes the metastatic potential in ovarian cancer. HY Sung, J Han, W Ju, JH Ahn – Oncology reports, 2016
  16. Surveillance and Evaluation of the Infection Risk of Free-Living Amoebae–Acanthamoeba in Aquatic Environments. BM Hsu – International Journal of Environmental Science and technology, 2016
  17. Two highly similar DEAD box proteins, OsRH2 and OsRH34, homologous to eukaryotic initiation factor 4AIII, play roles of the exon junction complex in regulating growth and development in rice. H Chun-Kai, YS Sie, C Yu-Fu, H Tian-Sheng Tian-Sheng, Huang; Chung-An, Lu- BMC Plant Biology , 2016
  18. Oil Palm Defensin: A Thermal Stable Peptide that Restricts the Mycelial Growth of Ganoderma boninense. YC Tan, CL Ang, MY Wong, CL Ho – Protein and peptide letters, 2016
  19. DNA barcoding reveals that the common cupped oyster in Taiwan is the Portuguese oyster Crassostrea angulata (Ostreoida; Ostreidae), not C. gigas. ST Hsiao, SC Chuang, KS Chen, PH Ho, CL Wu – Scientific reports, 2016
  20. DDX3 functions in antiviral innate immunity through translational control of PACT. MC Lai, HS Sun, SW Wang, WY Tarn – The FEBS journal, 2016
  21. Characterization of mussel H2A. Z. 2: a new H2A. Z variant preferentially expressed in germinal tissues from Mytilus. C Rivera-Casas, R Gonzalez-Romero, Ángel Vizoso-Vazquez,Manjinder S. Cheema,c M. Esperanza Cerdán,b Josefina Méndez,d Juan Ausió,c Jose M. Eirin-Lopeza- Biochemistry and Cell Biology, 2016
  22. Both Phosphorus Fertilizers and Indigenous Bacteria Enhance Arsenic Release into Groundwater in Arsenic-Contaminated Aquifers. TY Lin, CC Wei, CW Huang, CH Chang, – Journal of agricultural …, 2016
  23. Distinct function of metal-reducing bacteria from sediment and groundwater in controlling the arsenic mobilization in sedimentary aquifer. KL Lu, CW Liu, VHC Liao, CM Liao – J Bioremed Biodeg, 2016 – gwater.agec.ntu.edu.tw
  24. Seasonal difference of human adenoviruses in a subtropical river basin based on 1-year monthly survey. CW Tao, BM Hsu, PM Kao, WC Huang, TK Hsu, Ying-Ning HoYen-Ju LuCheng-Wei Fan- Environmental Science and Pollution Research, 2016
  25. Characterisation of fosfomycin resistance mechanisms and molecular epidemiology in extended-spectrum β-lactamase-producing Klebsiella pneumoniae isolates. PL Lu, YJ Hsieh, JE Lin, JW Huang, TY Yang,LLin,ST Tseng – International journal of Antimicrobial ,2016
  26. Oil Palm Defensin: A Thermal Stable Peptide that Restricts the Mycelial Growth of Ganoderma boninense. YC Tan, CL Ang, MY Wong, CL Ho – Protein and peptide letters, 2016 –
  27. Positive regulation of HIF-1A expression by EBV oncoprotein LMP1 in nasopharyngeal carcinoma cells. WW Sung, YC Chu, PR Chen, MH Liao, JW Lee – Cancer letters, 2016
  28. An l-ascorbate-6-phosphate lactonase from Streptococcus pneumoniae ATCC 49136 strain reveals metallo-β-lactamase activity. CY Chang, BR Li, YK Li – International journal of antimicrobial agents, 2016
  29. Open and closed evolutionary paths for drastic morphological changes, involving serial gene duplication, sub-functionalization, and selection. G Abe, SH Lee, J Li, CJ Chang, K Tamura, KG Ota – Scientific reports, 2016


  1. PecS regulates the urate-responsive expression of type 1 fimbriae in Klebsiella pneumoniae CG43. ZC Wang, CJ Liu, YJ Huang, YS Wang , HLing Peng-, microbiology2015 –
  2. Functional properties of the major outer membrane protein in Stenotrophomonas maltophilia. YY Chen, HC Wu, JW Lin, SF Weng – Journal of Microbiology, 2015
  3. Gene expression profiling of fatty acid biosynthetic pathway during interaction of oil palm .with the mutualistic fungus Glomus etunicatum. A Khodavandi, F Alizadeh – Acta physiologiae plantarum, 2015 –
  4. Cyclophilin A as a downstream effector of PI3K/Akt signalling pathway in multiple myeloma cells. ZL Lin, HJ Wu, JA Chen, KC Lin,JH Hsu- Cell biochemistry and funtion, 2015
  5. Knock-out of glucose dehydrogenase gene in Gluconacetobacter xylinus for bacterial cellulose production enhancement. CH Kuo, HY Teng, CK Lee – Biotechnology and Bioprocess Engineering, 2015
  6. Transcription factor Snail regulates tumor necrosis factor α–mediated synovial fibroblast activation in the rheumatoid joint. SY Chen, AL Shiau, YT Li, CC Lin, IM Jou,MF Liu,CL Wu,CL Wang- Arthritis & Rheumatology, 2015
  7. MGMT promoter methylation in non-neoplastic brain. CY Hsu, HL Ho, YC Chang-Chien, YW Chang,CDMing,THo, – Journal of neuro-oncology-2015
  8. Seasonal distribution of potentially pathogenic Acanthamoeba species from drinking water reservoirs in Taiwan. PM Kao, BM Hsu, TK Hsu, JH Liu, HY Chang,WT Ji,KJ Tenug,SH Huang,YL Huang- Science and Pollution Research, 2015
  9. Prevalence, quantification, and typing of human adenoviruses detected in river water in Taiwan. ZM Huang, BM Hsu, PM Kao, TY Chang,YC Yang,YL Huang – Science and Pollution Research, 2015 – Springer
  10. Isolation and Characterization of EgGST, a GlutathioneS-transferase Protein Transcript in Oil Palm. C Toh, P Namasivayam, HC Ling- TROPICAL AGRICULTURAL SCIENCE, Pertanika J. 2015
  11. Sugarcane bagasse as nutrient and support material for Cr (VI)-reducing biofilm. WHW Ahmad, JB Chyan, ZA Zakaria…,WA Ahmad- International Biodeterioration & Biodegradation, 2015
  12. Stop and smell the pollen: The role of olfaction and vision of the oriental honey buzzard in identifying food. SY Yang, BA Walther, GJ Weng – PloS one, 2015
  13. Tumor-specific suicide gene therapy for hepatocellular carcinoma by transcriptionally targeted retroviral replicating vectors. YH Lai, CC Lin, SH Chen, CK Tai – Gene therapy, 2015
  14. Molecular cloning and functional characterization of the hepcidin gene from the convict cichlid (Amatitlania nigrofasciata) and its expression pattern in response to lipopolysaccharide challenge. R Chi, LS Liao, RG Wang, CS Jhu, JL Wu-Fish Physiology and Biochemistry,2015
  15. Characterization of four B-chromosome-specific RAPDs and the development of SCAR markers on the maize B-chromosome. KW Kao, CY Lin, SF Peng, YM Cheng – Molecular Genetics and Genomics, 2015
  16. Evolutionary dynamics of two satellite DNA families in rock lizards of the genus Iberolacerta (Squamata, Lacertidae): different histories but common traits. V Rojo, A Martínez-Lage, M Giovannotti-Chromosome Research,2015
  17. TG-interacting factor transcriptionally induced by AKT/FOXO3A is a negative regulator that antagonizes arsenic trioxide-induced cancer cell apoptosis. ZM Liu, HY Tseng, YL Cheng, BW Yeh, WJ Wu,HS Huang- Toxicology and applied Pharmacology, 2015
  18. Bacillus formosensis sp. nov., isolated from pesticide wastewater. SY Lin, A Hameed, YC Liu, YH Hsu,WA Lai,WS Yen- CC Young- Microbiology Society, 2015


  1. Functional characterization and transcriptional analysis of galE gene encoding a UDP-galactose 4-epimerase in Xanthomonas campestris pv. Campestris. CT Li, CT Liao, SC Du, YP Hsiao, HH Lo,YMHsiao – Microbiological Research, 2014
  2. Use of Aspergillus niger β-glucosidase II gene (bglII) promoter elements to construct an efficient expression vector. CH Li, TR Yan – Journal of the Taiwan Institute of Chemical Engineers, 2014
  3. Utility of fluorescence in situ hybridization for ploidy and p57 immunostaining in discriminating hydatidiform moles. KH Chen, SC Hsu, HY Chen, KF Ng,TC Cheng – Biochemical and Biophysical Research Communications, 2014
  4. Expression of a gene encoding β‐ureidopropionase is critical for pollen germination in tomatoes. YH Shen, YH Chen, HY Liu, FY Chiang, Yi-Chieh Wang,Liang-Yu Hou,Jeng-Shane Lin,C-C Lin,Hsin-Hung Lin,Hsi-Mei Lai,Shih-Tong Jeng- Physiologia plantarum, 2014
  5. Rubisco expression in the dinoflagellate Symbiodinium sp. is influenced by both photoperiod and endosymbiotic lifestyle. AB Mayfield, YY Hsiao, HK Chen, CS Chen – Marine biotechnology, 2014
  6. A mathematical model of bimodal epigenetic control of miR-193a in ovarian cancer stem cells. FHC Cheng, BD Aguda, JC Tsai, M Kochańczyk – PloS one, 2014
  7. Anderson B. Mayfield, Yi-Yuong Hsiao. HK Chen, CS Chen – Mar Biotechnol, 2014
  8. Organ-and stress-specific expression of the ASR genes in rice. J Pérez-Díaz, TM Wu, R Pérez-Díaz, S Ruíz-Lara – Plant cell reports, 2014
  9. Screening differentially expressed genes in an amphipod (Hyalella azteca) exposed to fungicide vinclozolin by suppression subtractive hybridization. YH Wu, TM Wu, CY Hong, YS Wang,JH Yuang – Journal of Environmental Science and Health, 2014
  10. Isolation and expression analysis of transcripts encoding metallothioneins in oil palm. AB Al-Shanfari, SNA Abdullah – Biologia plantarum, 2014
  11. Detection of torque teno sus virus 1 and 2 in porcine tissues by in situ hybridization using multi-strained pooled probes. Y Lee, CM Lin, CR Jeng, VF Pang – Veterinary microbiology, 2014
  12. Optimization protein productivity of human interleukin-2 through codon usage, gene copy number and intracellular tRNA concentration in CHO cells. KC Ou, CY Wang, KT Liu, YL Chen, YC Chen,MDLai,MD Yen- Biochemical and Biophysical Research Communications, 2014
  13. Promoter hypermethylation and silencing of tissue factor pathway inhibitor-2 in oral squamous cell carcinoma. YH Lai, RY He, JL Chou Michael W-Y Chan, Yu-Fen Li,Chien-Kuo Tai,- Journal of Translational Medicine , 2014
  14. Aberrant DNA methylation in the IFITM1 promoter enhances the metastatic phenotype in an intraperitoneal xenograft model of human ovarian cancer. NH Kim, HY Sung, EN Choi, D Lyu – Oncology reports, 2014
  15. Aberrant hypomethylation-mediated AGR2 overexpression induces an aggressive phenotype in ovarian cancer cells. HY Sung, EN Choi, D Lyu, AK Park, Woong Ju Jung-Hyuck Ahn- Oncology reports, 2014
  16. Characterization of the Cryptic AV3 Promoter of Ageratum Yellow Vein Virus in Prokaryotic and Eukaryotic Systems. WC Wang, CY Wu, YC Lai, NS Lin, YH Hsu, CC Hu – PloS one, 2014
  17. FKBP12 regulates the localization and processing of amyloid precursor protein in human cell lines. FL Liu, TY Liu, FL Kung – Journal of biosciences, 2014
  18. Overexpression of mucin 13 due to promoter methylation promotes aggressive behavior in ovarian cancer cells. HY Sung, AK Park, W Ju, JH Ahn – Yonsei medical journal, 2014
  19. DNA hypomethylation-mediated overexpression of carbonic anhydrase 9 induces an aggressive phenotype in ovarian cancer cells. HY Sung, W Ju, JH Ahn – Yonsei medical journal, 2014
  20. The Chaperone‐like Activity and Structure of Mutant H119G of Rat Lens αB‐crystallin: A Study of Divalent Metal Ion Binding Site. SY Lu, K Reddy, D Naveen Kumar Reddy,Fu-Yung Huang – Journal of the Chinese chemistry society ,2014
  21. Amyloid beta-mediated epigenetic alteration of insulin-like growth factor binding protein 3 controls cell survival in Alzheimer’s disease. HY Sung, EN Choi, D Lyu, I Mook-Jung, JH Ahn – PloS one, 2014
  22. Zebrafish WNK lysine deficient protein kinase 1 (wnk1) affects angiogenesis associated with VEGF signaling. JG Lai, SM Tsai, HC Tu, WC Chen, FJ Kou, JW Lu – PloS one, 2014
  23. Selection of reliable reference genes for gene expression studies using quantitative real-time PCR in navel orange fruit development and pummelo floral organs. J Wu, S Su, L Fu, Y Zhang, L Chai, H Yi – Scientia Horticulturae, 2014
  24. The origin of the bifurcated axial skeletal system in the twin-tail goldfish. G Abe, SH Lee, M Chang, SC Liu, HY Tsai,KG Ota,- Nature communication 2014
  25. Interference of Co-Amplified Nuclear Mitochondrial DNA Sequences on the Determination of Human mtDNA. HC Yen, SL Li, WC Hsu, P Tang –plos, 2014


  1. FimK regulation on the expression of type 1 fimbriae in Klebsiella pneumoniae CG43S3. ZC Wang, CJ Huang, YJ Huang, CC WuHLPeng- Microbiology, 2013
  2. Up-regulation of neutrophil activating protein in Helicobacter pylori under high-salt stress: Structural and phylogenetic comparison with bacterial iron-binding ferritins. JH Liao, YH Sun, CH Hsu, YC Lin, SH Wu, CJ Kuo,CHHuang,SHChiou – Biochimie, 2013
  3. The role of Sp1 and EZH2 in the regulation of LMX1A in cervical cancer cell. WC Lin, MD Yan, PN Yu, HJ Li, CC Kuo, CL HsuYW Lin- Biochimica et Biophysica Acta (BBA) – Molecular Cell Research,2013
  1. The phylogenetic analysis and putative function of lysine 2, 3-aminomutase from methanoarchaea infers the potential biocatalysts for the synthesis of β-lysine. CC Hung, MC Lai – Journal of Microbiology, Immunology and Infection, 2013
  2. A transducer for microbial sensory rhodopsin that adopts GTG as a start codon is identified in Haloarcula marismortui. HY Fu, YH Lu, HP Yi, CS Yang – Journal of Photochemistry and Photobiology B: Biology6.2013
  3. Effects of Divalent Metal Ions on the Chaperone Activity and Structure of Rat Lens H18G Mutant αB‐Crystallin. SY Lu, FY Huang – Journal of the Chinese Chemical Society, 2013
  4. GsmR, a response regulator with an HD‐related output domain in Xanthomonas campestris, is positively controlled by Clp and is involved in the expression of …. YF Liu, CT Liao, WL Song, PC Hsu, SC Du,HHLio,YM Hsiao – The FEBS , 2013 –
  5. ADAR2-mediated editing of miR-214 and miR-122 precursor and antisense RNA transcripts in liver cancers. WH Liu, CH Chen, KH Yeh, CL Li, YJ Wu, DS Chen, Pei-Jer Chen, Shiou-Hwei Yeh- PloS one, 2013
  6. Molecular epidemiology of integron-associated antimicrobial gene cassettes in the clinical isolates of Acinetobacter baumannii from northern Taiwan. MF Lin, ML Liou, CC Tu, HW Yeh, Chung-Yu Lan- Annals of laboratory Medicine, 2013
  7. The effect of thermal contact resistance on heat management in a shuttling PCR system. JJ Chen, WH Chen, YS Shie – Applied Mechanics and Materials, 2013
  8. Sequence analysis and gene expression of putative oil palm chitinase and chitinase-like proteins in response to colonization of Ganoderma boninense and Trichoderma harzianum. KA Yeoh, A Othman, S Meon, F Abdullah… – Molecular biology reports, 2013
  9. Screening of Infectious Hypodermal and Haematopoietic Necrosis Virus (IHHNV) infections in wild freshwater prawn, Macrobrachium Rosenbergii, in Malaysia. M Khalid, H Nita – 2013 –
  10. Polymerase Chain Reaction Microfluidic Devices with Integrated Water Cooling Channel. JJ Chen, CM Shen, SJ Chen – Applied Mechanics and Materials, 2013
  11. Real-time PCR method for the detection and quantification of Acanthamoeba species in various types of water samples. PM Kao, MC Tung, BM Hsu, HL Tsai, CY She, Shu-Min ShenWen-Chien Huang- Parasitology research, 2013
  12. A simple and effective method for RNA isolation and cDNA library construction from the brown seaweed Sargassum polycystum (Fucales, Phaeophyceae). MC Sim, CL Ho, SM Phang – Journal of applied phycology, 2013
  13. Epigenetic silencing of PTPRR activates MAPK signaling, promotes metastasis and serves as a biomarker of invasive cervical cancer. PH Su, YW Lin, RL Huang, YP Liao, HY Lee- Oncogene;2013
  14. A Microfluidic Device Integrated Active Cooling Channel for DNA Amplification. JJ Chen, XC Qiu, CM Shen, SJ Chen, Yu Wei Ko – Transactions of the Canadian Society for Mechanical Engineering, 2013
  15. Analytical study of a microfludic DNA amplification chip using water cooling effect. JJ Chen, CM Shen, YW Ko – Biomedical microdevices, 2013
  16. Differential regulation and activity against oxidative stress of Dps proteins in Bacillus cereus. JC Shu, PC Soo, JC Chen, SH Hsu, LC Chen,CYChen,SHLiang,LMBuu,CCCen – International Journal of Medical Microbiology, 2013
  17. Continuous-Flow Polymerase Chain Reaction Chip by Water Cooling. JJ Chen, SJ Chen, YW Ko – Engineering in Agriculture, Environment and Food, 2013
  18. Estrogen receptor α (ESR1) over-expression mediated apoptosis in Hep3B cells by binding with SP1 proteins. Chuan-Chou Tu, V Bharath Kumar, Cecilia Hsuan Day, Wei-Wen Kuo, Su-Peng Yeh, Ray-Jade Chen, Chen-Rong Liao, Hsiao-Yu Chen, Fuu-Jen Tsai, Wen-Jun Wu, Chih-Yang Huang- Journal of molecular endocrinology, 2013
  19. Comparison of viremia of type II porcine reproductive and respiratory syndrome virus in naturally infected pigs by zip nucleic acid probe-based real-time PCR. CN Lin, WH Lin, LN Hung,SYWang,MT Chiou – BMC veterinary central, 2013