{"id":5959,"date":"2020-08-03T15:25:14","date_gmt":"2020-08-03T07:25:14","guid":{"rendered":"http:\/\/si.secda.info\/yb_md\/?page_id=5959"},"modified":"2022-08-22T13:19:55","modified_gmt":"2022-08-22T05:19:55","slug":"home-14","status":"publish","type":"page","link":"https:\/\/si.secda.info\/yb_md\/?page_id=5959","title":{"rendered":"YLEX & SCOS & Protein Marker publications"},"content":{"rendered":"

[et_pb_section fb_built=”1″ specialty=”on” custom_padding_last_edited=”on|desktop” padding_top_bottom_link_2=”false” padding_left_right_link_2=”false” padding_top_2=”0px” padding_bottom_2=”0px” _builder_version=”4.0.7″ custom_padding=”0px||0px||false|false” custom_padding_tablet=”” custom_padding_phone=””][et_pb_column type=”1_4″ _builder_version=”3.25″ custom_padding=”|||” custom_padding__hover=”|||”][et_pb_menu menu_id=”52″ active_link_color=”#000000″ _builder_version=”4.0.6″ menu_font=”|600|||||||” menu_text_color=”#000000″ menu_font_size=”15px” width=”100%” custom_padding=”|||0px||”][\/et_pb_menu][\/et_pb_column][et_pb_column type=”3_4″ specialty_columns=”3″ _builder_version=”3.25″ custom_padding=”|||” custom_padding__hover=”|||”][et_pb_row_inner _builder_version=”4.0.7″][et_pb_column_inner saved_specialty_column_type=”3_4″ _builder_version=”4.0.7″][et_pb_text _builder_version=”4.0.6″ custom_padding=”|||3px||”]<\/p>\n

YLEX & SCOS & Protein Marker publications<\/span><\/p>\n

<\/span><\/p>\n

YLEX Yeast Expression Kit<\/strong><\/span><\/p>\n

1.\u00a0Expression of AHPND toxin genes (pirAB), quorum sensing master regulator gene (luxR) and transmembrane transcriptional regulator gene (toxR) in Vibrio parahaemolyticus and Vibrio harveyi during infection of Penaeus vannamei (Bonne, 1931). Sarmila Muthukrishnan, Mohamed Shariff, M.Y. Ina-Salwany, Fatimah Md Yusoff, I. Natrah \u2013 Aquaculture<\/strong>, 2022<\/p>\n

2. Prototyping Yarrowia lipolytica for industrial production of hyperthermophilic enzymes- a case of \u03b2-glucosidase (CelB) from Pyrococcus furiosus. Kurshedaktar M. Shaikh, Vijay Pawale, Vishwanath S. Khadye, Suraj Sharma, Annamma A. Odaneth – Biochemical Engineering Journal<\/strong>, 2021<\/p>\n

3. Yarrowia lipolytica<\/em> Strains and Their Biotechnological Applications: How Natural Biodiversity and Metabolic Engineering Could Contribute to Cell Factories Improvement. Madzak, Catherine – Journal of Fungi<\/strong>, 2021<\/p>\n

4. Yarrowia lipolytica engineering as a source of microbial cell factories. Catherine Madzak – Academic Press<\/strong>, 2021<\/p>\n

5. Metabolic engineering of Yarrowia lipolytica for the production of isoprene. Shaikh KM, Odaneth AA. – Biotechnol Prog.<\/strong>, 2021<\/p>\n

6. Disruption of the\u00a0Snf1<\/em>Gene Enhances Cell Growth and Reduces the Metabolic Burden in Cellulase-Expressing and Lipid-Accumulating\u00a0Yarrowia lipolytica<\/em>. Wei H, Wang W, Knoshaug EP, Chen X, Van Wychen S, Bomble YJ, Himmel ME, Zhang M – Front Microbiol.<\/strong>, 2021<\/p>\n

7. Mapping enzyme catalysis with metabolic biosensing. Xu, L., Chang, KC., Payne, E.M.\u00a0et al.<\/em>– Nature Communications<\/strong>, 2021<\/p>\n

8. Disrupting a phospholipase A2<\/sub>gene increasing lipid accumulation in the oleaginous yeast\u00a0Yarrowia lipolytica<\/em>. Li JX, Xu J, Ruan JC, Meng HM, Su H, Han XF, Lu M, Li FL, Wang SA. – Appl Microbiol<\/strong>., 2021<\/p>\n

9. Hybrid promoter engineering strategies in\u00a0Yarrowia lipolytica<\/em>: isoamyl alcohol production as a test study. Zhao, Y., Liu, S., Lu, Z.\u00a0et al.<\/em> – Biotechnol Biofuels<\/strong>, 2021<\/p>\n

10. A Golden-Gate Based Cloning Toolkit to Build Violacein Pathway Libraries in\u00a0Yarrowia lipolytica<\/em>. Yingjia Tong, Jingwen Zhou, Liang Zhang, and Peng Xu \u2013 ACS Publications<\/strong>, 2021<\/p>\n

11. Microbial synthesis of wax esters. Ya-Hue Valerie Soong, Le Zhao, Na Liu, Peng Yu, Carmen Lopez, Andrew Olson, Hsi-Wu Wong, Zengyi Shao, Dongming Xie – Metabolic Engineering<\/strong>, 2021<\/p>\n

12. Chimeric cellobiohydrolase I expression, activity, and biochemical properties in three oleaginous yeast. Alahuhta, M., Xu, Q., Knoshaug, E.P.\u00a0<\/span>et al. <\/em>– <\/span>Biotechnol Biofuels<\/strong>, 2021<\/span><\/p>\n

13. Disrupting a phospholipase A2 gene increasing lipid accumulation in the oleaginous yeast Yarrowia lipolytica, Jiaxin Li, Jing Xu, Jianchang Ruan, Huimin Meng, Hang Su\u00a0 Xingfeng Han, Ming Lu, Fuli Li, Shi\u2019an Wang-<\/span>Journal of Applied Microbiology<\/strong>,2020<\/span><\/p>\n

14. Established and Upcoming Yeast Expression Systems, Burcu G\u00fcnd\u00fcz Erg\u00fcn, Damla H\u00fccceto\u011fullar\u0131, Sibel \u00d6zt\u00fc<\/span>rk, Eda \u00c7elik, P<\/span>\u0131nar \u00c7al\u0131k-<\/span>Methods<\/b>\u00a0in<\/strong>\u00a0<\/span>Molecular Biology<\/b>\u00a0<\/span>,2019<\/span><\/p>\n

15. Ameliorating the Metabolic Burden of the Co-expression of Secreted Fungal Cellulases in a High Lipid-Accumulating Yarrowia lipolytica Strain by Medium C\/N Ratio and a Chemical Chaperone, Hui Wei1-<\/span>Frontiers in Microbiology<\/strong>,2019<\/span><\/p>\n

16. Engineered microbes and methods for microbial oil production, Gregory Stephanopoulos, Mitchell Tai, Sagar Chakraborty-<\/span>Massachusetts Institute of Technology, Cambridge, MA (United States)<\/strong>,2018<\/span><\/p>\n

17. Robust signal peptides for protein secretion in Yarrowia lipolytica: identification and characterization of novel secretory tags, Ewelina Celi\u0144ska, Monika Borkowska, Wojciech Bia\u0142as, Paulina Korpys, Jean-Marc Nicaud- <\/span>Applied Microbiology and Biotechnology<\/strong>,2018<\/span><\/p>\n

18. Engineering the architecture of erythritol-inducible promoters for regulated and enhanced gene expression in Yarrowia lipolytica. Young-Kyoung Park, Paulina Korpys , Monika Kubiak, Ewelina Celinska, Paul Soudier, Pauline Tr\u00e9bulle, Macarena Larroude, Tristan Rossignol, Jean-<\/span>Marc Nicaud<\/strong>,2018<\/span><\/p>\n

19. Expression of an endoglucanase\u2013cellobiohydrolase fusion protein in Saccharomyces cerevisiae, Yarrowia lipolytica, and Lipomyces starkeyi, Qi Xu, Markus Alahuhta, Hui Wei, Eric P. Knoshaug, Wei Wang, John O. Baker, Todd Vander Wall, Michael E. Himmel, Min Zhang- <\/span>Biotechnology for Biofuels<\/strong>,2018<\/span><\/p>\n

20. Engineering Yarrowia lipolytica for Use in Biotechnological Applications: A Review of Major Achievements and Recent Innovations, Catherine Madzak- <\/span>Molecular Biotechnology<\/strong>,2018<\/span><\/p>\n

\u00a021.\u00a0YaliBricks, a versatile genetic toolkit for streamlined and rapid pathway engineering in Yarrowia lipolytica, Lynn Wonga, Jake Engel, Erqing Jin, Benjamin Holdridge, Peng Xu-<\/span>Metabolic Engineering Communications,<\/strong>2017<\/span><\/p>\n

22. Lipid production in Yarrowia lipolytica is maximized by engineering cytosolic redox, metabolism K Qiao- <\/span>Nature Biotechnology<\/strong>, 2017<\/span><\/p>\n

23. Enhanced production of insect raw-starch-digesting alpha-amylase accompanied by high erythritol synthesis in recombinant Yarrowia lipolytica fed-batch cultures at high-cell-densities, E Celi\u0144ska \u2013<\/span> Process Biochemistry<\/strong>, 2017<\/span><\/p>\n

24. Engineering oxidative stress defense pathways to build a robust lipid production platform in Yarrowia lipolytica, P Xu- <\/span>Biotechnology and Bioengineering<\/strong>, 2017<\/span><\/p>\n

25. A molecular genetic toolbox for Yarrowia lipolytica, EL Bredeweg- <\/span>Biotechnology for Biofuels<\/strong>, 2017<\/span><\/p>\n

26. Evaluation of heterologous \u03b1-amylase production in two expression platforms dedicated for Yarrowia lipolytica: commercial Po1g\u2013pYLSC (php4d) and custom-made, A18\u2013pYLTEF (pTEF). Celi\u0144ska , Borkowska , Bia\u0142as \u2013<\/span>Y<\/strong>east<\/strong>,2016<\/span><\/p>\n

27. Engineering Yarrowia lipolytica as a platform for synthesis of drop-in transportation fuels and oleochemicals, P Xu \u2013 <\/span>PNAS<\/strong>, 2016<\/span><\/p>\n

28. Engineering Yarrowia lipolytica for poly-3-hydroxybutyrate production, ZJ Li- <\/span>Journal of Industrial Microbiology & Biotechnology<\/strong>, 2016<\/span><\/p>\n

29. Functional overexpression and characterization of lipogenesis-related genes in the oleaginous yeast Yarrowia lipolytica , AM Silverman-<\/span> Applied Microbiology and Biotechnology<\/strong>, 2016<\/span><\/p>\n

30. ntegrated bioprocess for conversion of gaseous substrates to liquids, P Hu \u2013 <\/span>Proceedings of the National Academy of Sciences of The United States Of, America (PNAS)<\/strong>, 2016<\/span><\/p>\n

31. The expression of the Cuphea palustris thioesterase CpFatB2 in Yarrowia lipolytica triggers oleic acid accumulation, A Stefan \u2013 <\/span>Biotechnology progress<\/strong>, 2016<\/span><\/p>\n

32. Fatty alcohol production in Lipomyces starkeyi and Yarrowia lipolytica, W Wang \u2013 <\/span>Biotechnology for Biofuels<\/strong>, 2016<\/span><\/p>\n

33. Characterization of phosphatidic acid phosphatase activity in the oleaginous yeast Yarrowia lipolytica and its role in lipid biosynthesis, D Hardman \u2013 <\/span>Yeast<\/strong>, 2016<\/span><\/p>\n

34. Engineering lipid overproduction in the oleaginous yeast Yarrowia lipolytica, K Qiao- <\/span>Metabolic Engineering ,<\/strong>2015<\/span><\/p>\n

35. Yarrowia lipolytica: recent achievements in heterologous protein expression and, pathway engineeringC Madzak \u2013 <\/span>Applied microbiology and biotechnology<\/strong>, 2015<\/span><\/p>\n

36.\u00a0Cloning, expression, and purification of insect (Sitophilus oryzae) alpha-amylase, able to digest granular starch, in Yarrowia lipolytica host, E Celi\u0144ska \u2013<\/span> Applied microbiology and biotechnology<\/strong>, 2015<\/span><\/p>\n

37. High-throughput transformation method for Yarrowia lipolytica mutant library, screening, C Leplat \u2013 <\/span>FEMS yeast research<\/strong>, 2015<\/span><\/p>\n

38. Biotechnological applications of Yarrowia lipolytica: past, present and future, HH Liu- <\/span>Biotechnology Advances<\/strong>, 2015<\/span><\/p>\n

39. Genetic engineering of non conventional yeast for the production of valuable compounds, A Sibirny \u2013 <\/span>Microb Biotechnol Prog Trends<\/strong>, 2014<\/span><\/p>\n

40. Heterologous expression of xylanase enzymes in lipogenic yeast Yarrowia lipolytica, W Wang \u2013<\/span> PloS one<\/strong>, 2014<\/span><\/p>\n

41. Engineering towards a complete heterologous cellulase secretome in Yarrowia lipolytica reveals its potential for consolidated bioprocessing, H Wei \u2013 <\/span>Biotechnology for Biofuels<\/strong>, 2014<\/span><\/p>\n

42. Biodiesel production under subcritical solvent condition using subcritical water treated whole Jatropha curcas seed kernels and possible use of hydrolysates to grow Yarrowia lipolytica, AW Go- <\/span>Fuel<\/strong>, 2014<\/span><\/p>\n

43. Engineering the push and pull of lipid biosynthesis in oleaginous yeast Yarrowia lipolytica for biofuel production, M Tai \u2013<\/span> Metabolic engineering<\/strong>, 2013<\/span><\/p>\n

44. Bioethanol production from Yarrowia lipolytica Po1g biomass, YA Tsigie- <\/span>Bioresource Technology<\/strong>, 2013<\/span><\/p>\n

45. A study on the mechanism of subcritical water treatment to maximize extractable cellular lipids, PLT. Nguyen \u2013 <\/span>Biomass and Bioenergy<\/strong>, 2013<\/span><\/p>\n

46. Accumulation of lipid production in Chlorella minutissima by triacylglycerol biosynthesis-related genes cloned from Saccharomyces cerevisiae and Yarrowia lipolytica, HJ Hsieh \u2013 The Journal of Microbiology, 2012<\/span><\/p>\n

47. Yarrowia lipolytica JM Nicaud \u2013 <\/span>Yeast<\/strong>, 2012<\/span><\/p>\n

48. Oil Production from Yarrowia lipolytica Po1g Using , Rice Bran Hydrolysate. YA Tsigie- <\/span>Journal of Biomedicine and Biotechnology<\/strong>, 2012<\/span><\/p>\n

49. Maximizing biodiesel production from Yarrowia lipolytica Po1g biomass using, subcritical water pretreatment. YA Tsigie \u2013 <\/span>Bioresource technology<\/strong>, 2012<\/span><\/p>\n

50. High efficiency transformation by electroporation of Yarrowia lipolytica, JH Wang \u2013 <\/span>The Journal of Microbiology<\/strong>, 2011<\/span><\/p>\n

51. Cloning and expression of a tyrosinase from Aspergillus oryzae in Yarrowia lipolytica: application in L-DOPA biotransformation, A Rao \u2013 <\/span>Applied microbiology and biotechnology<\/strong>, 2011<\/span><\/p>\n

52. Lipid production from Yarrowia lipolytica Po1g grown in sugarcane bagasse hydrolysate,YA Tsigie \u2013 <\/span>Bioresource Technology<\/strong>, 2011<\/span><\/p>\n

53. Co-expression of heterologous desaturase genes in Yarrowia lipolytica. LT Chuang \u2013 <\/span>New biotechnology<\/strong>, 2010<\/span><\/p>\n

54. Heterologous expression of Thermobifida fusca thermostable alpha-amylase in Yarrowia lipolytica and its application in boiling stable resistant sago starch preparation. CH Yang \u2013 <\/span>Journal of Industrial Microbiology & Biotechnology<\/strong>, 2010<\/span><\/p>\n

<\/strong><\/p>\n

<\/strong><\/p>\n

SCOS<\/strong><\/span><\/p>\n

1.Direct fermentation of cellulose to ethanol by Saccharomyces cerevisiae displaying a bifunctional cellobiohydrolase gene from Orpinomyces sp. Y102. Jeng-Chen Liu, Wan-Jhu Chang, Teng-Chieh Hsu, Hui-Jye Chen, Yo-Chia Chen-Renewable Energy<\/strong>, 2020<\/p>\n

<\/strong><\/p>\n

<\/strong><\/span><\/p>\n

Proteomics-Sharp Protein Marker III<\/strong><\/span><\/p>\n

1.Berberine Activates Aryl Hydrocarbon Receptor but Suppresses CYP1A1 Induction through miR-21-3p Stimulation in MCF-7 Breast Cancer Cells, Sheng-Nan Lo, Chun-Wei Wang, Yueh-Shieh Chen, Chiung-Chiao Huang, Tian-Shung Wu, Lih-Ann Li, I-Jung Lee, Yune-Fang Ueng-molecules<\/strong>,2017<\/p>\n

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